CDS

Accession Number TCMCG047C06891
gbkey CDS
Protein Id GFP85456.1
Location join(1491964..1492173,1492748..1492851,1493025..1493049,1493548..1493582,1494112..1494283,1497180..1497249,1497564..1497631,1497754..1497816,1497943..1498052,1498135..1498235,1498406..1498467,1498577..1498717,1498939..1499067,1499282..1499328,1499423..1499486,1499586..1499706,1499918..1499976,1500074..1500142,1500382..1500522,1500712..1500776,1500867..1500963,1501246..1501305,1501383..1501535,1502392..1502416,1502610..1502762,1502848..1503027,1503273..1503463)
Organism Phtheirospermum japonicum
locus_tag PHJA_000689300

Protein

Length 904aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000105.1
Definition cleavage stimulation factor subunit 77 [Phtheirospermum japonicum]
Locus_tag PHJA_000689300

EGGNOG-MAPPER Annotation

COG_category A
Description Tetratricopeptide repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14408        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006353        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006369        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042868        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTCCAGCTTCTATCGAGCAGTCGATTTGCGCTGGGCCTGTCGATCGACTGGATTAGCAGTCGATCGACTGGCATTGCTGCTCCTGGCTCGATTTTCTTGTTCTTTTCTCCAAACGCTAGCCAGTTGTCATTCCTTGTTCGCGCTATGTTCCCTTACTTGTCTGCACTTATTCGTTTCATAGCAAGTCGAATGGAATGCCTTAAGCGTATGTTGCCCTTGTTGCAGCCATTTACCAAAAGTTTGGCCAACGTCTTGCTTCATATACACTCGCTATGCTATGCTTGGACAGTGGTTGTTGCTAGCACCAGTACGTCACCTCCCGAGTTCATTCTCTATGACAATCTTGCTATCGATTCAGAGTTTGCTCGGAGATTAAGCGAAGAAAACTGGAGATTGAAGAAAGAGGTGTTAGAGCTCTGGTCGTCGATGAAGATGGAGAAGCCACCGCCGCCGCAGGCAGCCGCTGGATTGGGGCAGGCACAACCGCAGTTTTTTCATCATAATCACGTGGAGGCGGTCCACGAGAAAGCGTTACATCTTTTGTCAGTTCAAGAACTCACTGGAATAATCCTCTACCCCACGGCCGTTAACCGCCGCCCGTCGCAGCCTGCCGATTGGCAAGATGGGAATGCGGATAAATTCAACATCGAAGCTGCAGAGATTCTTGCTAATGAGGCACTGCGGTTGTCAATCTCAGATTCAGTACCAATATACGAGAAACTTCTTGCTACATTCCCAACTTCGGCAAAATATTGGAAGCAGTATGTTGAAGCACTCATGGCTGCAAACAATGATGAAGCAGCAAGACAAGTATTTAGCCGCTGTCTTTTGATTTGCTCGCAAGTTCCTCTTTGGCGCTGTTACATCCGCTTCATAAGGAAAATCAATGACATGAAGGGAATAGAGGGTCAGGAAGAGACTAAGAAAGCTTATGAATTCATGCTTAACTATGTTGGAGCTGATATAGCATCTGGTCCTGTGTGGATGGAGTACATTGCATATTTAAAATCCTTACCGGCCCAAACAACACAGGGAGAGTCACAACGTATGACTTCAATACGTAAGACGTATCAGAGGGCGATTGTTATGCCTACTCATCATGTTGAACAGCTTTGGAGGGACTATGAGAATTTTGAGAATTCAGTTAGCCGTGCACTGGCAAAAGGTTTGGTGGCTGAATATCAACCAAAATACAACAGTGCAAGGGCTGTTTACAGGGAGCGCAAGAAGTATGTTGATGAAATTGATTGGAATATGCTTGCTATTCCTCCTTCCGGTTCTCCGAAGGAGGAAATGCAATGGATGGCCTGGAAAAAGTTCTTAAACTTTGAGAAAGGCAACCCCCAGAGAATTGACAATGCTTCTGCAAACAAACGAATTGCATTTGCTTACGAGCAGTGTCTCATGTATTTGTATCATTACCCTGATATATGGTACGACTATGCCACGTGGCATGCAAAAGGTGGTTCCAGAGACTCGGCAATTAAAGTTTTCCAGCGGGCTTTGAAGGCTCTTCCTGATTCCGAAATGCTAAGGTATGCTTATGCTGAGCTAGAAGAATCTCATGGAGCAGCTCAGGCAGCGAAAAAAGTATATGAAAGTCTTGTTGGGGATGGTGTGAATGCAACAGCTCTATCACACATCCAGTTCATTAGGTTTTTAAGGAGGACCGAAGGGGTTGAAGCTGCTCGCAAATACTTTCTAGATGCACGCAAATCTCCAAACTGCACTTACCATGTTTACGTTGCATATGCGATGATGGCCTTTTGTATAGATAAAGACGCAAAGCTTGCTCACAATATATTTGAAGCAGGTCTCAAACGTTTTATGCATGAGCCTAGCTACATTCTCGAATATGCTGATTTCTTGTGCCGGTTGAATGACGATAGAAATATCCGTGCTTTGTTTGAACGAGCACTGAGCTCCCTTCCTCCTGATGAATCCGTTGAGGTATGGAATAGATTCAGCCAATTTGAGCAGACCTATGGAGATCTTGCCAGCATATTAAAGGTTGAGCAAAGGAGGAAAGAAGCATTATGCAGAACAGCTGAGAATGGGGAATCAGCTTTAGACAATTCTCTGCAAGATGTTATATCACGCTATAGCTTTATGGATTTGTGGCCTTGTTCCCCTAAGGACTTGGATCATTTAGCTCGCCAACAGTTAGGACAGTGCTTAGAAACTAAAAGTCCTCCTGCCCCTGGAATCTCTATTGTCCCAAACGCGTTGCCCAATGGCGTAACTGTAAATAGTGGAGGAGGCACAACTGCAATCAACGATGTTTTGAAAGCCTTACCACCATCGGTAGCAACCTTCGTGGTGAATCTGCCACCTATTGAAGGTCCATCGCCTGATGTTGATTTTGTGATATCCATATGCTTGCAAAGCAACATAGCGTCAGTCAATGGGACACCTCAACAGTTGCAAGCCGGGCCCGCTCCAAGCACTAGCGACGTATCTGGCTCAAGCAAATTCAAACAAACAAGAGACAGACAACCGGGAAAAAGGAAAGACTCTCAGAGACAAGAGGAGGATGACACAACTACTGTACAAAGTCAACCGCTGCCTAGAGATGCTTTCAAGATGCGGCAGTTGCAGAAAGCCCGTGCTACCACCAGTTCACGTGCGGGTACGGGTACGGGTACAGGTGGAGGTGGTTCTGCGTCCTATGGAAGCGGGTTTTCGGGCGATCTCTCTGGTAGCTCTAGTTGA
Protein:  
MVQLLSSSRFALGLSIDWISSRSTGIAAPGSIFLFFSPNASQLSFLVRAMFPYLSALIRFIASRMECLKRMLPLLQPFTKSLANVLLHIHSLCYAWTVVVASTSTSPPEFILYDNLAIDSEFARRLSEENWRLKKEVLELWSSMKMEKPPPPQAAAGLGQAQPQFFHHNHVEAVHEKALHLLSVQELTGIILYPTAVNRRPSQPADWQDGNADKFNIEAAEILANEALRLSISDSVPIYEKLLATFPTSAKYWKQYVEALMAANNDEAARQVFSRCLLICSQVPLWRCYIRFIRKINDMKGIEGQEETKKAYEFMLNYVGADIASGPVWMEYIAYLKSLPAQTTQGESQRMTSIRKTYQRAIVMPTHHVEQLWRDYENFENSVSRALAKGLVAEYQPKYNSARAVYRERKKYVDEIDWNMLAIPPSGSPKEEMQWMAWKKFLNFEKGNPQRIDNASANKRIAFAYEQCLMYLYHYPDIWYDYATWHAKGGSRDSAIKVFQRALKALPDSEMLRYAYAELEESHGAAQAAKKVYESLVGDGVNATALSHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCIDKDAKLAHNIFEAGLKRFMHEPSYILEYADFLCRLNDDRNIRALFERALSSLPPDESVEVWNRFSQFEQTYGDLASILKVEQRRKEALCRTAENGESALDNSLQDVISRYSFMDLWPCSPKDLDHLARQQLGQCLETKSPPAPGISIVPNALPNGVTVNSGGGTTAINDVLKALPPSVATFVVNLPPIEGPSPDVDFVISICLQSNIASVNGTPQQLQAGPAPSTSDVSGSSKFKQTRDRQPGKRKDSQRQEEDDTTTVQSQPLPRDAFKMRQLQKARATTSSRAGTGTGTGGGGSASYGSGFSGDLSGSSS